via command line I got a lot of notices and warnings, but no error messages:
[pre-install]
[load: upgrade.xml]
[version: 3.1.0.1]
[code: Installer Installer::syncSeriesAssocType]
[data: dbscripts/xml/upgrade/2.4.0_preupdate_usageStatistics.xml (skipped)]
[data: dbscripts/xml/upgrade/2.4.0_preupdate_usageStatistics2.xml (skipped)]
[code: Installer Installer::removeReviewEntries]
[data: dbscripts/xml/upgrade/3.0.0_preupdate.xml]
PHP Notice: Only variables should be assigned by reference in /opt/ojs-gthj/lib/pkp/classes/db/DBDataXMLParser.inc.php on line 122
Notice: Only variables should be assigned by reference in /opt/ojs-gthj/lib/pkp/classes/db/DBDataXMLParser.inc.php on line 122
PHP Notice: Only variables should be assigned by reference in /opt/ojs-gthj/lib/pkp/classes/db/DBDataXMLParser.inc.php on line 122
Notice: Only variables should be assigned by reference in /opt/ojs-gthj/lib/pkp/classes/db/DBDataXMLParser.inc.php on line 122
PHP Notice: Only variables should be assigned by reference in /opt/ojs-gthj/lib/pkp/classes/db/DBDataXMLParser.inc.php on line 122
Notice: Only variables should be assigned by reference in /opt/ojs-gthj/lib/pkp/classes/db/DBDataXMLParser.inc.php on line 122
[data: dbscripts/xml/upgrade/3.0.0_adaptTimedViews.xml (skipped)]
[data: dbscripts/xml/upgrade/3.0.0_adaptReferrals.xml]
PHP Notice: Only variables should be assigned by reference in /opt/ojs-gthj/lib/pkp/classes/db/DBDataXMLParser.inc.php on line 122
Notice: Only variables should be assigned by reference in /opt/ojs-gthj/lib/pkp/classes/db/DBDataXMLParser.inc.php on line 122
[data: dbscripts/xml/upgrade/3.0.0_adaptBooksForReview.xml]
PHP Notice: Only variables should be assigned by reference in /opt/ojs-gthj/lib/pkp/classes/db/DBDataXMLParser.inc.php on line 122
Notice: Only variables should be assigned by reference in /opt/ojs-gthj/lib/pkp/classes/db/DBDataXMLParser.inc.php on line 122
[data: dbscripts/xml/upgrade/remove_timed_views_bots.xml (skipped)]
[data: dbscripts/xml/upgrade/3.0.0_preupdate_commentsToEditor.xml]
[code: Installer Installer::concatenateIntoAbout]
[code: Installer Installer::concatenateIntoMasthead]
[data: dbscripts/xml/upgrade/3.1.0_preupdate_review_assignments.xml]
[data: dbscripts/xml/upgrade/3.1.0_preupdate_notes.xml]
[data: dbscripts/xml/upgrade/3.1.0_preupdate_payments.xml]
PHP Notice: Only variables should be assigned by reference in /opt/ojs-gthj/lib/pkp/classes/db/DBDataXMLParser.inc.php on line 122
Notice: Only variables should be assigned by reference in /opt/ojs-gthj/lib/pkp/classes/db/DBDataXMLParser.inc.php on line 122
[schema: lib/pkp/xml/schema/common.xml]
PHP Notice: Only variables should be passed by reference in /opt/ojs-gthj/lib/pkp/lib/adodb/adodb-xmlschema.inc.php on line 267
Notice: Only variables should be passed by reference in /opt/ojs-gthj/lib/pkp/lib/adodb/adodb-xmlschema.inc.php on line 267
PHP Notice: Only variables should be passed by reference in /opt/ojs-gthj/lib/pkp/lib/adodb/adodb-xmlschema.inc.php on line 267
Notice: Only variables should be passed by reference in /opt/ojs-gthj/lib/pkp/lib/adodb/adodb-xmlschema.inc.php on line 267
PHP Notice: Only variables should be passed by reference in /opt/ojs-gthj/lib/pkp/lib/adodb/adodb-xmlschema.inc.php on line 267
Notice: Only variables should be passed by reference in /opt/ojs-gthj/lib/pkp/lib/adodb/adodb-xmlschema.inc.php on line 267
PHP Notice: Only variables should be passed by reference in /opt/ojs-gthj/lib/pkp/lib/adodb/adodb-xmlschema.inc.php on line 267
Notice: Only variables should be passed by reference in /opt/ojs-gthj/lib/pkp/lib/adodb/adodb-xmlschema.inc.php on line 267
[data: dbscripts/xml/indexes.xml]
[code: Installer Installer::migrateCounterPluginUsageStatistics (skipped)]
[code: Installer Installer::migrateTimedViewsUsageStatistics (skipped)]
[code: Installer Installer::migrateDefaultUsageStatistics (skipped)]
[data: dbscripts/xml/upgrade/2.4.0_postUsageStatsMigration.xml (skipped)]
[data: dbscripts/xml/upgrade/2.4.0_postUsageStatsMigration2.xml (skipped)]
[data: dbscripts/xml/upgrade/2.4.0_postCounterMigration.xml (skipped)]
[data: dbscripts/xml/upgrade/2.4.0_postTimedViewsMigration.xml (skipped)]
[data: dbscripts/xml/upgrade/3.0.0_change_assoc_type.xml]
[data: dbscripts/xml/upgrade/3.0.0_change_assoc_type_metrics.xml]
[data: dbscripts/xml/upgrade/3.0.0_settings.xml]
[code: Installer Installer::installDefaultGenres]
[code: Installer Installer::migrateArticleMetadata]
PHP Warning: Declaration of SubmissionLanguageEntryDAO::getByControlledVocabId($controlledVocabId, $rangeInfo = NULL) should be compatible with ControlledVocabEntryDAO::getByControlledVocabId($controlledVocabId, $rangeInfo = NULL, $filter = NULL) in /opt/ojs-gthj/lib/pkp/classes/submission/SubmissionLanguageEntryDAO.inc.php on line 20
Warning: Declaration of SubmissionLanguageEntryDAO::getByControlledVocabId($controlledVocabId, $rangeInfo = NULL) should be compatible with ControlledVocabEntryDAO::getByControlledVocabId($controlledVocabId, $rangeInfo = NULL, $filter = NULL) in /opt/ojs-gthj/lib/pkp/classes/submission/SubmissionLanguageEntryDAO.inc.php on line 20
PHP Warning: Declaration of SubmissionDisciplineEntryDAO::getByControlledVocabId($controlledVocabId, $rangeInfo = NULL) should be compatible with ControlledVocabEntryDAO::getByControlledVocabId($controlledVocabId, $rangeInfo = NULL, $filter = NULL) in /opt/ojs-gthj/lib/pkp/classes/submission/SubmissionDisciplineEntryDAO.inc.php on line 44
Warning: Declaration of SubmissionDisciplineEntryDAO::getByControlledVocabId($controlledVocabId, $rangeInfo = NULL) should be compatible with ControlledVocabEntryDAO::getByControlledVocabId($controlledVocabId, $rangeInfo = NULL, $filter = NULL) in /opt/ojs-gthj/lib/pkp/classes/submission/SubmissionDisciplineEntryDAO.inc.php on line 44
PHP Warning: Declaration of SubmissionKeywordEntryDAO::getByControlledVocabId($controlledVocabId, $rangeInfo = NULL) should be compatible with ControlledVocabEntryDAO::getByControlledVocabId($controlledVocabId, $rangeInfo = NULL, $filter = NULL) in /opt/ojs-gthj/lib/pkp/classes/submission/SubmissionKeywordEntryDAO.inc.php on line 45
Warning: Declaration of SubmissionKeywordEntryDAO::getByControlledVocabId($controlledVocabId, $rangeInfo = NULL) should be compatible with ControlledVocabEntryDAO::getByControlledVocabId($controlledVocabId, $rangeInfo = NULL, $filter = NULL) in /opt/ojs-gthj/lib/pkp/classes/submission/SubmissionKeywordEntryDAO.inc.php on line 45
PHP Warning: Declaration of SubmissionAgencyEntryDAO::getByControlledVocabId($controlledVocabId, $rangeInfo = NULL) should be compatible with ControlledVocabEntryDAO::getByControlledVocabId($controlledVocabId, $rangeInfo = NULL, $filter = NULL) in /opt/ojs-gthj/lib/pkp/classes/submission/SubmissionAgencyEntryDAO.inc.php on line 44
Warning: Declaration of SubmissionAgencyEntryDAO::getByControlledVocabId($controlledVocabId, $rangeInfo = NULL) should be compatible with ControlledVocabEntryDAO::getByControlledVocabId($controlledVocabId, $rangeInfo = NULL, $filter = NULL) in /opt/ojs-gthj/lib/pkp/classes/submission/SubmissionAgencyEntryDAO.inc.php on line 44
[data: dbscripts/xml/upgrade/3.0.0_update.xml]
[code: Installer Installer::clearDataCache]
[code: Installer Installer::migrateUserRoles]
[code: Installer Installer::fixReviewForms]
[code: Installer Installer::htmlifyEmailTemplates]
[note: docs/release-notes/README-BEACON]
[code: Installer Installer::installEmailTemplate]
[code: Installer Installer::installEmailTemplate]
[code: Installer Installer::installEmailTemplate]
[code: Installer Installer::installEmailTemplate]
[code: Installer Installer::installEmailTemplate]
[code: Installer Installer::installEmailTemplate]
[data: dbscripts/xml/upgrade/3.0.0_scheduledTasks.xml]
[code: Installer Installer::localizeCustomBlockSettings]
[code: Installer Installer::convertEditorDecisionNotes]
[code: Installer Installer::convertQueries]
PHP Warning: Declaration of SubmissionFileDAO::fromRow($row) should be compatible with PKPSubmissionFileDAO::fromRow($row, $fileImplementation) in /opt/ojs-gthj/classes/article/SubmissionFileDAO.inc.php on line 23
Warning: Declaration of SubmissionFileDAO::fromRow($row) should be compatible with PKPSubmissionFileDAO::fromRow($row, $fileImplementation) in /opt/ojs-gthj/classes/article/SubmissionFileDAO.inc.php on line 23
[code: Installer Installer::migrateFiles]
[code: Installer Installer::convertSupplementaryFiles]
[code: Installer Installer::setFileUploader]
[code: Installer Installer::setFileName]
[data: dbscripts/xml/upgrade/3.0.0_postupdate.xml]
[data: dbscripts/xml/upgrade/3.0.0_pubId_settings.xml]
[data: dbscripts/xml/upgrade/3.0.0_postupgrade_galley_files.xml]
[data: dbscripts/xml/upgrade/3.0.0_postupgrade_metrics.xml]
[data: dbscripts/xml/upgrade/3.0.0_issue_settings.xml]
[data: dbscripts/xml/upgrade/3.0.0_submission_settings.xml]
[data: dbscripts/xml/upgrade/3.0.0_review_method.xml]
[data: dbscripts/xml/upgrade/3.0.0_edit_decisions.xml]
[code: Installer Installer::convertCommentsToEditor]
[note: docs/release-notes/README-3.0]
[note: docs/release-notes/README-3.0.1]
[data: dbscripts/xml/upgrade/3.0.2_update.xml]
[note: docs/release-notes/README-3.0.2]
[code: Installer Installer::moveReviewerFiles]
[code: Installer Installer::fixAuthorGroup]
[data: dbscripts/xml/upgrade/3.0.0_reviewer_files.xml]
[code: Installer Installer::removeCancelledReviewAssignments]
[data: dbscripts/xml/upgrade/3.1.0_notifications.xml]
[data: dbscripts/xml/upgrade/3.1.0_notes.xml]
[data: dbscripts/xml/upgrade/3.1.0_galley_settings.xml]
[data: dbscripts/xml/upgrade/3.1.0_update.xml]
[code: Installer Installer::repairImageAssociations]
[code: Installer Installer::installEmailTemplate]
[code: Installer Installer::installEmailTemplate]
[code: Installer Installer::installDefaultNavigationMenus]
[note: docs/release-notes/README-3.1.0]
[code: Installer Installer::addPluginVersions]
[post-install]
PHP Notice: Only variables should be passed by reference in /opt/ojs-gthj/lib/pkp/lib/adodb/adodb-xmlschema.inc.php on line 267
Notice: Only variables should be passed by reference in /opt/ojs-gthj/lib/pkp/lib/adodb/adodb-xmlschema.inc.php on line 267
PHP Notice: Only variables should be passed by reference in /opt/ojs-gthj/lib/pkp/lib/adodb/adodb-xmlschema.inc.php on line 267
Notice: Only variables should be passed by reference in /opt/ojs-gthj/lib/pkp/lib/adodb/adodb-xmlschema.inc.php on line 267
PHP Notice: Only variables should be assigned by reference in /opt/ojs-gthj/lib/pkp/classes/filter/FilterHelper.inc.php on line 106
Notice: Only variables should be assigned by reference in /opt/ojs-gthj/lib/pkp/classes/filter/FilterHelper.inc.php on line 106