I have tried to replicate it
I started a new journal in a “clean” install of OJS 3.2.1.0 (another journal was created the day before yesterday, but there I got the errors, so I started a new journal). I made a dummy submission and published it in an issue. When I published the issue the OK-box did not disappear, however when I clicked outside the box and updated the page, the issue was in the “back issues”.
I exported the issue as native XML. I made some modifications of the metadata. I also removed the id-tags since I thought those were related to the exported issue/article.
I get an empty box as results:
No error message in browser, but this Fatal Error:
[Thu Jun 25 07:28:42.898039 2020] [php7:error] [pid 31554] [client xx.xx.xx.xx:3204] PHP Fatal error: Uncaught Error: Call to a member function getData() on null in /var/www/html/folder/classes/search/ArticleSearchIndex.inc.php:38\nStack trace:\n#0 /var/www/html/folder/plugins/importexport/native/filter/NativeXmlArticleFilter.inc.php(61): ArticleSearchIndex->submissionMetadataChanged(Object(Submission))\n#1 /var/www/html/folder/lib/pkp/classes/filter/Filter.inc.php(449): NativeXmlArticleFilter->process(Object(DOMDocument))\n#2 /var/www/html/folder/plugins/importexport/native/filter/NativeXmlIssueFilter.inc.php(260): Filter->execute(Object(DOMDocument))\n#3 /var/www/html/folder/plugins/importexport/native/filter/NativeXmlIssueFilter.inc.php(238): NativeXmlIssueFilter->parseArticle(Object(DOMElement), Object(Issue))\n#4 /var/www/html/folder/plugins/importexport/native/filter/NativeXmlIssueFilter.inc.php(134): NativeXmlIssueFilter->parseArticles(Object(DOMElement), Object(Issue))\n#5 /var/www/html/folder/plugins/importexport/native/filter/Nati in /var/www/html/folder/classes/search/ArticleSearchIndex.inc.php on line 38, referer: https://domain.com/folder/index.php/bla/management/importexport/plugin/NativeImportExportPlugin
When changing from “Results” to another tab it is not possible to go back to “Results”.
I reload the page (…/management/importexport/plugin/NativeImportExportPlugin) and get:
I’ve got this error message in the log:
[Thu Jun 25 07:57:51.740277 2020] [php7:notice] [pid 11738] [client xx.xx.xx.xx:4574] Slim Application Error:\nType: Error\nMessage: Call to a member function getData() on null\nFile: /var/www/html/folder/lib/pkp/classes/submission/PKPSubmission.inc.php\nLine: 54\nTrace: #0 /var/www/html/folder/classes/services/PublicationService.inc.php(83): PKPSubmission->getBestId()\n#1 /var/www/html/folder/lib/pkp/classes/plugins/HookRegistry.inc.php(107): APP\\Services\\PublicationService->getPublicationProperties('Publication::ge...', Array)\n#2 /var/www/html/folder/lib/pkp/classes/services/PKPPublicationService.inc.php(222): HookRegistry::call('Publication::ge...', Array)\n#3 /var/www/html/folder/lib/pkp/classes/services/PKPPublicationService.inc.php(235): PKP\\Services\\PKPPublicationService->getProperties(Object(Publication), Array, Array)\n#4 /var/www/html/folder/lib/pkp/classes/services/PKPSubmissionService.inc.php(204): PKP\\Services\\PKPPublicationService->getSummaryProperties(Object(Publication), Array)\n#5 [internal function]: PKP\\Services\\PKPSubmissionService->PKP\\Services\\{closure}(Object(Publication))\n#6 /var/www/html/folder/lib/pkp/classes/services/PKPSubmissionService.inc.php(208): array_map(Object(Closure), Array)\n#7 /var/www/html/folder/lib/pkp/classes/services/PKPSubmissionService.inc.php(297): PKP\\Services\\PKPSubmissionService->getProperties(Object(Submission), Array, Array)\n#8 /var/www/html/folder/lib/pkp/api/v1/_submissions/PKPBackendSubmissionsHandler.inc.php(158): PKP\\Services\\PKPSubmissionService->getBackendListProperties(Object(Submission), Array)\n#9 [internal function]: PKPBackendSubmissionsHandler->getMany(Object(Slim\\Http\\Request), Object(APIResponse), Array)\n#10 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/Handlers/Strategies/RequestResponse.php(40): call_user_func(Array, Object(Slim\\Http\\Request), Object(APIResponse), Array)\n#11 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/Route.php(281): Slim\\Handlers\\Strategies\\RequestResponse->__invoke(Array, Object(Slim\\Http\\Request), Object(APIResponse), Array)\n#12 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/MiddlewareAwareTrait.php(117): Slim\\Route->__invoke(Object(Slim\\Http\\Request), Object(APIResponse))\n#13 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/Route.php(268): Slim\\Route->callMiddlewareStack(Object(Slim\\Http\\Request), Object(APIResponse))\n#14 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/App.php(503): Slim\\Route->run(Object(Slim\\Http\\Request), Object(APIResponse))\n#15 /var/www/html/folder/lib/pkp/classes/security/authorization/internal/ApiAuthorizationMiddleware.inc.php(77): Slim\\App->__invoke(Object(Slim\\Http\\Request), Object(APIResponse))\n#16 [internal function]: ApiAuthorizationMiddleware->__invoke(Object(Slim\\Http\\Request), Object(APIResponse), Object(Slim\\App))\n#17 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/DeferredCallable.php(57): call_user_func_array(Object(ApiAuthorizationMiddleware), Array)\n#18 [internal function]: Slim\\DeferredCallable->__invoke(Object(Slim\\Http\\Request), Object(APIResponse), Object(Slim\\App))\n#19 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/MiddlewareAwareTrait.php(70): call_user_func(Object(Slim\\DeferredCallable), Object(Slim\\Http\\Request), Object(APIResponse), Object(Slim\\App))\n#20 /var/www/html/folder/lib/pkp/classes/security/authorization/internal/ApiCsrfMiddleware.inc.php(46): Slim\\App->Slim\\{closure}(Object(Slim\\Http\\Request), Object(APIResponse))\n#21 [internal function]: ApiCsrfMiddleware->__invoke(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#22 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/DeferredCallable.php(57): call_user_func_array(Object(ApiCsrfMiddleware), Array)\n#23 [internal function]: Slim\\DeferredCallable->__invoke(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#24 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/MiddlewareAwareTrait.php(70): call_user_func(Object(Slim\\DeferredCallable), Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#25 /var/www/html/folder/lib/pkp/classes/security/authorization/internal/ApiTokenDecodingMiddleware.inc.php(82): Slim\\App->Slim\\{closure}(Object(Slim\\Http\\Request), Object(APIResponse))\n#26 [internal function]: ApiTokenDecodingMiddleware->__invoke(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#27 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/DeferredCallable.php(57): call_user_func_array(Object(ApiTokenDecodingMiddleware), Array)\n#28 [internal function]: Slim\\DeferredCallable->__invoke(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#29 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/MiddlewareAwareTrait.php(70): call_user_func(Object(Slim\\DeferredCallable), Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#30 /var/www/html/folder/lib/pkp/classes/handler/APIHandler.inc.php(68): Slim\\App->Slim\\{closure}(Object(Slim\\Http\\Request), Object(APIResponse))\n#31 [internal function]: APIHandler->{closure}(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#32 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/DeferredCallable.php(57): call_user_func_array(Object(Closure), Array)\n#33 [internal function]: Slim\\DeferredCallable->__invoke(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#34 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/MiddlewareAwareTrait.php(70): call_user_func(Object(Slim\\DeferredCallable), Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#35 /var/www/html/folder/lib/pkp/classes/handler/APIHandler.inc.php(127): Slim\\App->Slim\\{closure}(Object(Slim\\Http\\Request), Object(APIResponse))\n#36 [internal function]: APIHandler->{closure}(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#37 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/DeferredCallable.php(57): call_user_func_array(Object(Closure), Array)\n#38 [internal function]: Slim\\DeferredCallable->__invoke(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#39 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/MiddlewareAwareTrait.php(70): call_user_func(Object(Slim\\DeferredCallable), Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#40 /var/www/html/folder/lib/pkp/classes/handler/APIHandler.inc.php(132): Slim\\App->Slim\\{closure}(Object(Slim\\Http\\Request), Object(APIResponse))\n#41 [internal function]: APIHandler->{closure}(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#42 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/DeferredCallable.php(57): call_user_func_array(Object(Closure), Array)\n#43 [internal function]: Slim\\DeferredCallable->__invoke(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#44 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/MiddlewareAwareTrait.php(70): call_user_func(Object(Slim\\DeferredCallable), Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#45 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/MiddlewareAwareTrait.php(117): Slim\\App->Slim\\{closure}(Object(Slim\\Http\\Request), Object(APIResponse))\n#46 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/App.php(392): Slim\\App->callMiddlewareStack(Object(Slim\\Http\\Request), Object(APIResponse))\n#47 /var/www/html/folder/lib/pkp/classes/handler/APIHandler.inc.php(124): Slim\\App->process(Object(Slim\\Http\\Request), Object(APIResponse))\n#48 [internal function]: APIHandler->{closure}(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#49 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/DeferredCallable.php(57): call_user
Browser 500 error:
Request URL: https://domain.com/folder/index.php/bla/api/v1/_submissions?searchPhrase=&count=100&offset=0&_=1593064670392
Request Method: GET
Status Code: 500 Internal Server Error
Remote Address: xx.xx.xx.xx:443
Referrer Policy: no-referrer-when-downgrade
Access-Control-Allow-Origin: *
Connection: close
Content-Length: 445
Content-Type: text/html;charset=UTF-8
Date: Thu, 25 Jun 2020 05:57:51 GMT
Server: Apache/2.4.6 (CentOS) OpenSSL/1.0.2k-fips PHP/7.3.18
Set-Cookie: OJSSID=deleted; expires=Thu, 01-Jan-1970 00:00:01 GMT; Max-Age=0; path=/testclean/
Set-Cookie: OJSSID=ev4sfodspic0mvu93pj57cpvvr; expires=Sat, 25-Jul-2020 05:57:51 GMT; Max-Age=2592000; path=/testclean/; domain=domain.com
Strict-Transport-Security: max-age=31536000
X-Powered-By: PHP/7.3.18
Accept: */*
Accept-Encoding: gzip, deflate, br
Accept-Language: sv-SE,sv;q=0.9,en-US;q=0.8,en;q=0.7
Cache-Control: no-cache
Connection: keep-alive
Cookie: OJSSID=ev4sfodspic0mvu93pj57cpvvr; _ga=GA1.2.1850397724.1576576648; _hjid=eb5ab55b-8967-423f-86cc-368b22db4655; __utmz=9675306.1578375694.1.1.utmcsr=(direct)|utmccn=(direct)|utmcmd=(none); __utmv=9675306.|1=Bes%C3%B6kare=Anst%C3%A4lld=1; cookieconsent_status=dismiss; _sp_id.f4e2=fd383d72-1669-495a-81bb-80a87353334b.1582094050.1.1582094359.1582094050.7c9b8b5d-e55b-49e4-ad33-342f84ed4a09; userIdP9=66af7ecb33ad29ea157e00ba6cd7aaef; langCookie=sv; _ga=GA1.3.1850397724.1576576648; __utma=9675306.1850397724.1576576648.1592309649.1592385310.9; _gid=GA1.2.487283531.1592800142; OJSSID=6aglu9ameb7s19duvt6ab9celq
Host: domain.com
Pragma: no-cache
Referer: https://domain.com/folder/index.php/bla/management/importexport/plugin/NativeImportExportPlugin
Sec-Fetch-Dest: empty
Sec-Fetch-Mode: cors
Sec-Fetch-Site: same-origin
User-Agent: Mozilla/5.0 (Windows NT 10.0; Win64; x64) AppleWebKit/537.36 (KHTML, like Gecko) Chrome/83.0.4103.116 Safari/537.36
X-Requested-With: XMLHttpRequest
searchPhrase:
count: 100
offset: 0
_: 1593064670392
Then I get the same error when going to “submissions”
[Thu Jun 25 07:59:06.143485 2020] [php7:notice] [pid 16275] [client xx.xx.xx.xx:4652] Slim Application Error:\nType: Error\nMessage: Call to a member function getData() on null\nFile: /var/www/html/folder/lib/pkp/classes/submission/PKPSubmission.inc.php\nLine: 54\nTrace: #0 /var/www/html/folder/classes/services/PublicationService.inc.php(83): PKPSubmission->getBestId()\n#1 /var/www/html/folder/lib/pkp/classes/plugins/HookRegistry.inc.php(107): APP\\Services\\PublicationService->getPublicationProperties('Publication::ge...', Array)\n#2 /var/www/html/folder/lib/pkp/classes/services/PKPPublicationService.inc.php(222): HookRegistry::call('Publication::ge...', Array)\n#3 /var/www/html/folder/lib/pkp/classes/services/PKPPublicationService.inc.php(235): PKP\\Services\\PKPPublicationService->getProperties(Object(Publication), Array, Array)\n#4 /var/www/html/folder/lib/pkp/classes/services/PKPSubmissionService.inc.php(204): PKP\\Services\\PKPPublicationService->getSummaryProperties(Object(Publication), Array)\n#5 [internal function]: PKP\\Services\\PKPSubmissionService->PKP\\Services\\{closure}(Object(Publication))\n#6 /var/www/html/folder/lib/pkp/classes/services/PKPSubmissionService.inc.php(208): array_map(Object(Closure), Array)\n#7 /var/www/html/folder/lib/pkp/classes/services/PKPSubmissionService.inc.php(297): PKP\\Services\\PKPSubmissionService->getProperties(Object(Submission), Array, Array)\n#8 /var/www/html/folder/lib/pkp/api/v1/_submissions/PKPBackendSubmissionsHandler.inc.php(158): PKP\\Services\\PKPSubmissionService->getBackendListProperties(Object(Submission), Array)\n#9 [internal function]: PKPBackendSubmissionsHandler->getMany(Object(Slim\\Http\\Request), Object(APIResponse), Array)\n#10 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/Handlers/Strategies/RequestResponse.php(40): call_user_func(Array, Object(Slim\\Http\\Request), Object(APIResponse), Array)\n#11 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/Route.php(281): Slim\\Handlers\\Strategies\\RequestResponse->__invoke(Array, Object(Slim\\Http\\Request), Object(APIResponse), Array)\n#12 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/MiddlewareAwareTrait.php(117): Slim\\Route->__invoke(Object(Slim\\Http\\Request), Object(APIResponse))\n#13 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/Route.php(268): Slim\\Route->callMiddlewareStack(Object(Slim\\Http\\Request), Object(APIResponse))\n#14 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/App.php(503): Slim\\Route->run(Object(Slim\\Http\\Request), Object(APIResponse))\n#15 /var/www/html/folder/lib/pkp/classes/security/authorization/internal/ApiAuthorizationMiddleware.inc.php(77): Slim\\App->__invoke(Object(Slim\\Http\\Request), Object(APIResponse))\n#16 [internal function]: ApiAuthorizationMiddleware->__invoke(Object(Slim\\Http\\Request), Object(APIResponse), Object(Slim\\App))\n#17 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/DeferredCallable.php(57): call_user_func_array(Object(ApiAuthorizationMiddleware), Array)\n#18 [internal function]: Slim\\DeferredCallable->__invoke(Object(Slim\\Http\\Request), Object(APIResponse), Object(Slim\\App))\n#19 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/MiddlewareAwareTrait.php(70): call_user_func(Object(Slim\\DeferredCallable), Object(Slim\\Http\\Request), Object(APIResponse), Object(Slim\\App))\n#20 /var/www/html/folder/lib/pkp/classes/security/authorization/internal/ApiCsrfMiddleware.inc.php(46): Slim\\App->Slim\\{closure}(Object(Slim\\Http\\Request), Object(APIResponse))\n#21 [internal function]: ApiCsrfMiddleware->__invoke(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#22 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/DeferredCallable.php(57): call_user_func_array(Object(ApiCsrfMiddleware), Array)\n#23 [internal function]: Slim\\DeferredCallable->__invoke(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#24 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/MiddlewareAwareTrait.php(70): call_user_func(Object(Slim\\DeferredCallable), Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#25 /var/www/html/folder/lib/pkp/classes/security/authorization/internal/ApiTokenDecodingMiddleware.inc.php(82): Slim\\App->Slim\\{closure}(Object(Slim\\Http\\Request), Object(APIResponse))\n#26 [internal function]: ApiTokenDecodingMiddleware->__invoke(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#27 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/DeferredCallable.php(57): call_user_func_array(Object(ApiTokenDecodingMiddleware), Array)\n#28 [internal function]: Slim\\DeferredCallable->__invoke(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#29 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/MiddlewareAwareTrait.php(70): call_user_func(Object(Slim\\DeferredCallable), Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#30 /var/www/html/folder/lib/pkp/classes/handler/APIHandler.inc.php(68): Slim\\App->Slim\\{closure}(Object(Slim\\Http\\Request), Object(APIResponse))\n#31 [internal function]: APIHandler->{closure}(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#32 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/DeferredCallable.php(57): call_user_func_array(Object(Closure), Array)\n#33 [internal function]: Slim\\DeferredCallable->__invoke(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#34 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/MiddlewareAwareTrait.php(70): call_user_func(Object(Slim\\DeferredCallable), Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#35 /var/www/html/folder/lib/pkp/classes/handler/APIHandler.inc.php(127): Slim\\App->Slim\\{closure}(Object(Slim\\Http\\Request), Object(APIResponse))\n#36 [internal function]: APIHandler->{closure}(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#37 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/DeferredCallable.php(57): call_user_func_array(Object(Closure), Array)\n#38 [internal function]: Slim\\DeferredCallable->__invoke(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#39 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/MiddlewareAwareTrait.php(70): call_user_func(Object(Slim\\DeferredCallable), Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#40 /var/www/html/folder/lib/pkp/classes/handler/APIHandler.inc.php(132): Slim\\App->Slim\\{closure}(Object(Slim\\Http\\Request), Object(APIResponse))\n#41 [internal function]: APIHandler->{closure}(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#42 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/DeferredCallable.php(57): call_user_func_array(Object(Closure), Array)\n#43 [internal function]: Slim\\DeferredCallable->__invoke(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#44 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/MiddlewareAwareTrait.php(70): call_user_func(Object(Slim\\DeferredCallable), Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#45 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/MiddlewareAwareTrait.php(117): Slim\\App->Slim\\{closure}(Object(Slim\\Http\\Request), Object(APIResponse))\n#46 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/App.php(392): Slim\\App->callMiddlewareStack(Object(Slim\\Http\\Request), Object(APIResponse))\n#47 /var/www/html/folder/lib/pkp/classes/handler/APIHandler.inc.php(124): Slim\\App->process(Object(Slim\\Http\\Request), Object(APIResponse))\n#48 [internal function]: APIHandler->{closure}(Object(Slim\\Http\\Request), Object(APIResponse), Object(Closure))\n#49 /var/www/html/folder/lib/pkp/lib/vendor/slim/slim/Slim/DeferredCallable.php(57): call_user
In “Archive” under “Submissions” i just see the spinner, and no articles listed.
Under Issues it looks like this:
and tryinig to edit there is only the spinner again:
No issue data is imported.
When I imported the first example (in the beginning of this thread), there was a issue galley imported and the sections were imported from the XML, but not the issue data.
I haven’t looked into the database yet. I am not so familiar to the setup there so then I need some guidance…
Hope this explanation helps you to understand my issue!
Best regards,